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Thainara Lima

PhD Student in Agriculture and Byosistems Engineering

Mississippi State University

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Research Interests: Remote Sensing, Micro- and macroalgae blooms, water quality, radiative transfer modeling,  computer vision for Earth observation, and domain-specific foundational models.

Thainara Lima is a PhD student in Agricultural and Biosystems Engineering at Mississippi State University and a NASA Early Career Research Fellow. Her PhD project develops scalable AI pipelines for large-scale geospatial data on HPC/GPU infrastructure, with a focus on global algal bloom detection in coastal waters. She explores Vision Transformers, semantic segmentation, and self-supervised learning for Earth observation, while advancing domain-aware foundational models. Her broader research interests span AI-driven innovation, multimodal learning, and sustainable monitoring solutions that integrate satellite data, computer vision, and high-performance computing for planetary-scale environmental challenges. She holds a master’s degree in Remote Sensing from the Brazilian Institute for Space Research (INPE), Brazil, where she worked on calibrating bio-optical and machine learning models using satellite data. She earned her bachelor’s degree in Geomatics and Surveying Engineering, with an internship at the University of New Brunswick in Canada, with a focus on GNSS, precision agriculture, and remote sensing. She possesses extensive experience in mapping and monitoring agricultural crops in Brazil using Earth Observation (EO) and deep learning, building independent, scalable pipelines that integrate data inges tion, advanced augmentation, and active learning loops. Thainara has collaborated with research groups at the National Research Council of Italy (CNR-IREA) and the Instrumentation Laboratory for Aquatic Systems (LabISA), applying hyperspectral analysis and deep learning to complex aquatic and terrestrial environments.

News

Oct, 2025 - New paper publication! 🎉🎉 AQUAVis is pipeline to integrate Landsat-Sentinel for aquatic applications, and it's now published in the Science of Remote Sensing! DOI: https://doi.org/10.1016/j.srs.2025.100294

Oct, 2025 - AGU25 presentation acceptance. I'll be presenting my study entitled Deep Learning Algal Bloom Mapping Using 30-m Harmonized Landsat-Sentinel at Global NEarshore Waters (Section H31R). Hope to see y'all there!

Aug, 2025 - Release of AquaPatcher, a Python package designed for extracting image patches over water. Medium post-release to understand the importance of patch sampling in Geo-AI.

Jun, 2025 - I'm honored and grateful to be one of the recipients of the USDA/MSU Summer Research Experience in High Performance Computing and Agriculture!

You can explore more about my work

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